Dear All,
I am getting problem with SLURM job submission. like this:
job_submission_slurmupdated.sh: line 44: module: command not found job_submission_slurmupdated.sh: line 45: module: command not found
These lines have two modules:
module load CHEMISTRY module load gromacs/2019
These are already sourced in .zshrc file and GROMACS is also working.
This is the beginning of script also:
#!/usr/local_rwth/bin/zsh
#SBATCH -p c18m
If anybody has any clue/idea to overcome this, please suggest me.
Thanks in advance. Best regards, Subrata.
On Wed, Aug 28, 2019 at 1:50 PM Krishna Murthy, Karthik Ravi < ravi.krishna@rwth-aachen.de> wrote:
Dear All, In the past (LSF) it was possible to submit parallel jobs on several cores for ABAQUS. However, now with SLURM i encounter the problem stated below: Abaqus Error: The number of cpus used is more than the total number of processors specified by the host list. mp_host_list: [[' ncm0081.hpc.itc.rwth-aachen.de', 1]]. Abaqus/Analysis exited with error(s). I suspect it is due to a fautly setting of the enviromental variable $R_WLM_ABAQUSHOSTLIST, as the job submission script, found on the RWTH documentation website states: cat << EOF > $abaqus_v6.env #verbose = 3 #ask_delete = OFF mp_file_system = (SHARED, LOCAL) mp_host_list = $R_WLM_ABAQUSHOSTLIST EOF It seems like currently there is only one host in that list, which i suspect to be insufficient when running on, let say 16 cores. Best Regards, Karthik _______________________________________________ claix18-slurm-pilot mailing list -- claix18-slurm-pilot@lists.rwth-aachen.de To unsubscribe send an email to claix18-slurm-pilot-leave@lists.rwth-aachen.de